View source for OOR/ConferenceCall 2013 06 25

= [[OpenOntologyRepository]]: "OOR-Ontohub-Gatekeeper API" Hackathon Session - Tue 2013_06_25  =

Session Topic: '''The "OOR-Ontohub-Gatekeeper API" Hackathon''' 

Session Co-chairs: '''TillMossakowski & KenBaclawski''' 

''This is the first of a series of regular activities for the OOR team. The plan is to devote one meeting a month to intense coding (or other low level development) work.'' 

== [[MeetingsCalls|Conference Call]] Details  ==

* Date: '''Tuesday, 25-Jun-2013''' 
* Start Time: 7:00am PDT / 10:00am EDT / 4:00pm CEST / 3:00pm BST / 1400 UTC 
** ref: [http://www.timeanddate.com/worldclock/fixedtime.html?month=6&day=25&year=2013&hour=7&min=0&sec=0&p1=224 World Clock] 
* Expected Call Duration: 1.5~2.0 hours 

* Dial-in: 
** '''Phone (US): +1 (206) 402-0100''' ... (long distance cost may apply) 
*** ... [ backup nbr: (415) 671-4335 ] 
*** when prompted enter '''Conference ID: 141184#''' 
** '''Skype: joinconference''' (i.e. make a skype call to the contact with skypeID="joinconference") ... (generally free-of-charge, when connecting from your computer ... [[VirtualSpeakerSessionTips|ref.]]) 
*** when prompted enter '''Conference ID: 141184#''' 
*** Unfamiliar with how to do this on Skype? ... 
**** Add the contact "joinconference" to your skype contact list first. To participate in the teleconference, make a skype call to "joinconference", then open the dial pad (see platform-specific instructions below) and enter the '''Conference ID: 141184#''' when prompted. 
*** Can't find Skype Dial pad? ... 
**** for Windows Skype users: Can't find Skype Dial pad? ... it's under the "Call" dropdown menu as "Show Dial pad" 
**** for Linux Skype users: please note that the dial-pad is only available on v4.1 (or later; or on the earlier Skype versions 2.x,) if the dialpad button is not shown in the call window you need to press the "d" hotkey to enable it. ... ([[VirtualSpeakerSessionTips|ref.]]) 

* '''Discussions and Q & A:''' 
** Nominally, when a presentation is in progress, the moderator will mute everyone, except for the speaker. 
** '''To un-mute, press "*7"''' ... '''To mute, press "*6"''' (please mute your phone, especially if you are in a noisy surrounding, or if you are introducing noise, echoes, etc. into the conference line.) 
** we will usually save all questions and discussions till after all presentations are through. You are encouraged to jot down questions onto the chat-area in the mean time (that way, they get documented; and you might even get some answers in the interim, through the chat.) 
** During the Q&A / discussion segment (when everyone is muted), '''If you want to speak''' or have questions or remarks to make, '''please raise your hand''' (virtually) '''by clicking on the "hand button"''' (lower right) on the chat session page. You may speak when acknowledged by the session moderator (again, press "*7" on your phone to un-mute). ''Test your voice and introduce yourself first before proceeding with your remarks, please.'' (Please remember to click on the "hand button" again (to lower your hand) and press "*6" on your phone to mute yourself after you are done speaking.) 

* '''In-session chat'''-room url: http://webconf.soaphub.org/conf/room/oor_20130625 
** instructions: once you got access to the page, click on the "settings" button, and identify yourself (by modifying the Name field from "anonymous" to your real name, like "JaneDoe"). 
** You can indicate that you want to ask a question verbally by clicking on the "hand" button, and wait for the moderator to call on you; or, type and send your question into the chat window at the bottom of the screen. 
** thanks to the soaphub.org folks, one can now use a jabber/xmpp client (e.g. gtalk) to join this chatroom. Just add the room as a buddy - (in our case here) oor_20130625@soaphub.org ... Handy for mobile devices! 

* '''Shared-screen support''' (VNC session), if applicable, will be started 5 minutes before the call at: http://vnc2.cim3.net:5800/ 
** view-only password: "ontolog" 
** if you plan to be logging into this shared-screen option (which the speaker may be navigating), and you are not familiar with the process, please try to call in 5 minutes before the start of the session so that we can work out the connection logistics. Help on this will generally not be available once the presentation starts. 
** people behind corporate firewalls may have difficulty accessing this. If that is the case, please download the '''[ slides]''' (where applicable) and running them locally. The speaker(s) will prompt you to advance the slides during the talk. 

* Please review our Virtual Session Tips and Ground Rules - see: [[VirtualSpeakerSessionTips]] 

* '''RSVP''' '' to [mailto:peter.yim@cim3.com peter.yim@cim3.com] appreciated,'' ... or simply just by adding yourself to the "Expected Attendee" list below (if you are a member of the team.) 

* This session, like all other Ontolog events, is open to the public. Information relating to this session is shared on this wiki page: http://ontolog.cim3.net/cgi-bin/wiki.pl?OOR/ConferenceCall_2013_06_25 

* Please note that this session may be recorded, and if so, the audio archive is expected to be made available as open content, along with the proceedings of the call to our community membership and the public at-large under [[WikiHomePage#Intellectual_Property_Rights_.28IPR.29_Policy|our prevailing open IPR policy]]. 

== Attendees  ==

* Attended: 
** [[TillMossakowski|Till Mossakowski]] (co-chair) 
** [[User:KennethBaclawski|Ken Baclawski]] (co-chair) 
** [[PeterYim|Peter P. Yim]] 
** [[BobSmith|Bob Smith]] 
** [[OliverKutz|Oliver Kutz]] 
** [[ToddSchneider|Todd Schneider]] 

* Expecting: 
*  
** ''(please add yourself to the list above if you are a member of the community, or, rsvp to <peter.yim@cim3.com> with the event title/date and your name and affiliation)'' 

* Regrets: 
** [[LeoObrst|Leo Obrst]] 
** [[MikeDean|Mike Dean]] 
** [[MichaelGruninger|Michael Gr&uuml;ninger]] 
** [[MikeBennett|Mike Bennett]] 
** ... 

=== Agenda Ideas  ===

* finish defining the OOR-Ontohub API 
* start defining the OOR-Gatekeeper requirements and then the API 
* set deliverables and due dates 
* ... ''(add yours)'' 

=== Resources  ===

* Ontohub-OOR API (updated snapshot from [[OntologySummit2013_Hackathon_Clinics_Ontohub_OOR_OOPS_Integration|HC-07]]) - http://ontolog.cim3.net/file/work/OpenOntologyRepository/OOR-Architecture/OOR-API/OOR-Ontohub-API_wip-snapshot_20130430c.pdf ([http://ontolog.cim3.net/file/work/OpenOntologyRepository/OOR-Architecture/OOR-API/ ref.]) 
* Ontohub-OOR API working document ([http://tinyurl.com/onto-arch google-doc]) - http://tinyurl.com/onto-arch 
* [http://ontolog.cim3.net/file/work/OntologySummit2013/Hackathon-Clinics/proposal/hackathon-proposal_oor_keeper--KenBaclawski-MaximoGurmendez_20130304b.pdf OOR-Keeper Integration Hackathon  Proposal] 

== Agenda & Proceedings  ==

'''[http://ontolog.cim3.net/file/work/OpenOntologyRepository/OOR-Architecture/OOR-API/ Archives]:''' 

* '''[http://tinyurl.com/onto-arch Ontohub-OOR API] working document''' 
** 2013.06.25 end-of-session [http://ontolog.cim3.net/file/work/OpenOntologyRepository/OOR-Architecture/OOR-API/OOR-Ontohub-API_wip-snapshot_20130625d.pdf OOR-API working document snapshot] 
* [http://ontolog.cim3.net/file/work/OpenOntologyRepository/OOR-Architecture/OOR-API/oor-hack-01_API_20130625b.mp3 audio recording of the session] ... [ 1:21:57 ; mp3 ; 9.38 MB ] 
* [http://ontolog.cim3.net/cgi-bin/wiki.pl?OOR/ConferenceCall_2013_06_25#nid3UJZ chat-transcript of this session] 

1. Meeting called to order: 

* [[TillMossakowski|Till Mossakowski]] & [[User:KennethBaclawski|Ken Baclawski]] took the chair and welcome everyone 
* [[User:KennethBaclawski|Ken Baclawski]] volunteered to collate the notes, but urged everyone to capture their thoughts and document them on the chat board, as usual. 
* review and adopt agenda 

* Urgent items or quick announcements 

2. Roll Call: 

* see [http://ontolog.cim3.net/cgi-bin/wiki.pl?OOR/ConferenceCall_2013_06_25#nid3UGL above] 

* welcome and intro of new member(s) (if applicable) 

3. '''Key discussion:''' 

4. '''Prior Discussions:''' 

4.1 Discussion: tactically, what shall we be doing differently in the next 6 to 12 months 

* Focused discussion on the tactics and action plans that will help put the recently refined OOR Strategy in place 
** explore how we might possibly leverage 
*** (i) ''OntologySummit2013 ... (done!)'' 
*** (ii) the [[OntologyBasedStandards]] initiative, and 
*** (iii) IAOA, 
... to provide synergies for all. 

4.2 Setting the metrics - what does "success" look like 

4.3 '''Action planning for "content drive"''' (getting people to upload ontologies) ... ''(deferred discussion of this item)'' 

* ''(discussion 2011.05.06):'' 
** an adopted Architecture & API is definitely crucial, but that's not all 
* All team members are encouraged to mull over how we can get to that state effectively 
** in particular ... how do we make this a "successful" community-driven, open source project!? 
* (discussion 2011.08.07)'' ... 
** ref. IAOA Committee and SIG session at FOIS (2012.07.25) discussion: 
*** IAOA Ontology Registry and Repository Committee to put focus on contents 
*** getting FOIS papers to be submitted with cited ontologies and their metadata, and have those ontologies hosted on OOR 

* 4.4 '''Coordination for getting work funded''' 
** ref. "opportunities" 
*** http://ontolog.cim3.net/forum/ontolog-forum/2012-07/msg00057.html 
*** http://ontolog.cim3.net/forum/ontolog-forum/2012-04/msg00028.html#nid04 
** we will tackle this in the upcoming "dedicated" session, where we will start by strategizing how we might proceed ... ref [http://ontolog.cim3.net/cgi-bin/wiki.pl?OOR/ConferenceCall_2012_08_07#nid3DJB above]. 

* 4.5 '''OOR instances OOR: status update and coordination''' ... ''(deferred discussion of this item)'' 
* '''OOR:''' sandbox, devbox, test-instance, socop, colore, ontohub, ornl-daac, mmi-orr, new ncbo-appliance, ... '''status update and coordination''' 
** updated '''OOR index page''' - http://oor.net - opens to the index page for accessing any of the OOR instances; takes one to the OOR project homepage after 15 seconds ''... now with a "pause button"'' 
** '''OOR project homepage''' - http://www.oor.net - opens to the OOR project homepage on this wiki (same effect as http://OpenOntologyRepository.org or http://oor.cim3.net) 
** servers/instances: 
** OOR-01 - (old instance, being retired) re-direct to project homepage 
** OOR-02 - ci server 
** OOR-03 - sandbox - http://sandbox.oor.net 
** OOR-04 - socop - http://socop.oor.net 
** OOR-05 - devbox - http://dev.oor.net 
** OOR-06 - test-00 - http://test-00.oor.net 
** status review ... 

* 4.6 '''Getting us to a stage when we can run a OOR-production box''' ... ''(deferred discussion of this item)'' 
** we need a gatekeeping/policy module in place - [KenBaclawski] 

* 4.7 '''Renewed OOR tactics''' (as agreed during the [http://ontolog.cim3.net/cgi-bin/wiki.pl?OOR/ConferenceCall_2013_06_18#nid3U9U 2013.06.18 meeting]) - there is general consensus we would change to a more bottom-up approach (rather than the "top-down" approach we have been taking ... 
** we will allow each oor node project to develop (colore, ontohub, socop, oor public instance, etc.) on their own, and coordinate the "team" effort through the use of a shared set of metadata, API and the UI (e.g. how people download (or even upload) ontologies, etc.) 
** The key is to ensure that each of the ontology repository projects in OOR are interoperable from the software perspective, uniform in the GUI, and they use a shared approach to ontology metadata 
** we will make oor.net to be an ontology registry, which then links to the ontologies in the actual ontology repository where the ontology is described 
** actions will be focused on developing three things (hopefully within the next 3 months): the set of metadata, the API, and some shared thoughts on the UI 
** after that, we will focus on building up content with each OOR node tackling the domain(s) they are best with 

== 5. IM Chat Transcript captured during the session  ==

see raw transcript [http://ontolog.cim3.net/file/work/OpenOntologyRepository/OOR-Architecture/OOR-API/oor-hack-01_chat-transcript_unedited_20130625a.txt here]. 

(for better clarity, the version below is a [http://ontolog.cim3.net/file/work/OpenOntologyRepository/OOR-Architecture/OOR-API/oor-hack-01_chat-transcript_edited_20130625b.txt re-organized and lightly edited chat-transcript].)

Participants are welcome to make light edits to their own contributions as they see fit. 

-- begin in-session chat-transcript -- 

------

Chat transcript from room: oor_20130625

2013-06-25 GMT-08:00 [PDT]

------ 

[07:01] [[PeterYim|Peter P. Yim]]: Welcome to the 

''' [[OpenOntologyRepository]]: "OOR-Ontohub-Gatekeeper API" Hackathon Session - Tue 2013_06_25 ''' 

Session Topic: The "OOR-Ontohub-Gatekeeper API" Hackathon    (3TNE) 

Session Co-chairs: [[TillMossakowski|Till Mossakowski]] & [[User:KennethBaclawski|Ken Baclawski]]    (3TNF) 

This is the first of a series of regular activities for the OOR team. The plan is to devote one meeting 

a month to intense coding (or other low level development) work. 

Session page: http://ontolog.cim3.net/cgi-bin/wiki.pl?OOR/ConferenceCall_2013_06_25 

Attendees: [[TillMossakowski|Till Mossakowski]] (co-chair), [[User:KennethBaclawski|Ken Baclawski]] (co-chair), [[BobSmith|Bob Smith]], [[OliverKutz|Oliver Kutz]], [[PeterYim|Peter P. Yim]], ToddSchneider. 

''' Proceedings ''' 

[07:11] [[User:KennethBaclawski|Ken Baclawski]]: please point your browsers to the Ontohub-OOR API working document (google-doc) 

- at: http://tinyurl.com/onto-arch 

[07:19] [[TillMossakowski|Till Mossakowski]]: We do not require the API to be minimal, but a minimal set of methods shall be identified.

Derived methods can be implemented in terms of the minimal set; a reference implementation will show how to do this. 

[07:20] [[TillMossakowski|Till Mossakowski]]: We will include also the methods from [[BioPortal]] not being in the OORService API 

[07:21] [[TillMossakowski|Till Mossakowski]]: The API should not be specific to any kind of ontology framework. 

[07:26] [[TillMossakowski|Till Mossakowski]]: the method delivering all ontology latest version is take from 

the [[BioPortal]] API: http://www.bioontology.org/wiki/index.php/BioPortal_REST_services 

[7:31] [[TillMossakowski|Till Mossakowski]]: Ken: what about "latest draft version" vs. "latest released version"? 

[7:34] [[User:KennethBaclawski|Ken Baclawski]]: The API should incorporate the branching of a software repository service such as git. 

[7:35] [[TillMossakowski|Till Mossakowski]]: we should incorporate some aspects of the git API, involving repositories and branches 

[7:36] [[TillMossakowski|Till Mossakowski]]: Peter: ontologies provide a richer structure (classes, attributes, modules) than 

files in a file system 

[7:42] [[User:KennethBaclawski|Ken Baclawski]]: Each ontology has a URI and it follows linked data principles. 

[7:45] [[PeterYim|Peter P. Yim]]: ref. consensus from our Jun-18 OOR-Strategy meeting - we will focused on developing 

three things (hopefully within the next 3 months): the set of metadata, the API, and some shared thoughts 

on the UI - see: http://ontolog.cim3.net/cgi-bin/wiki.pl?OOR/ConferenceCall_2013_06_18#nid3UE6 

[7:56] [[User:KennethBaclawski|Ken Baclawski]]: The method for retrieving symbols and sentences should have a filter parameter. 

[7:56] [[TillMossakowski|Till Mossakowski]]:

<Ontology name="FamilyBase" logic="OWL2" refname="FamilyBase" relxpath="/">

<Declarations>

<Symbol kind="Class" name="Father">Class Father</Symbol>

<Symbol kind="Class" name="Female">Class Female</Symbol>

<Symbol kind="Class" name="Grandmother">Class Grandmother</Symbol>

<Symbol kind="Class" name="Hybrid">Class Hybrid</Symbol>

<Symbol kind="Class" name="Man">Class Man</Symbol>

<Symbol kind="Class" name="Married">Class Married</Symbol>

<Symbol kind="Class" name="MarriedMother">Class MarriedMother</Symbol>

<Symbol kind="Class" name="Mother">Class Mother</Symbol>

<Symbol kind="Class" name="[[MotherWithManyChildren]]>Class [[MotherWithManyChildren]]</Symbol>

<Symbol kind="Class" name="[[MotherWithoutDaughter]]>Class [[MotherWithoutDaughter]]</Symbol>

<Symbol kind="Class" name="Parent>Class Parent</Symbol>

<Symbol kind="Class" name="Person>Class Person</Symbol>

<Symbol kind="Class" name="Wife>Class Wife</Symbol>

<Symbol kind="Class" name="Woman>Class Woman</Symbol>

<Symbol kind="ObjectProperty" name="hasChild>ObjectProperty hasChild</Symbol>

<Symbol kind="ObjectProperty" name="hasHusband>ObjectProperty hasHusband</Symbol>

<Symbol kind="ObjectProperty" name="hasParent>ObjectProperty hasParent</Symbol>

<Symbol kind="Individual" name="clara>NamedIndividual clara</Symbol>

<Symbol kind="Individual" name="john>NamedIndividual john</Symbol>

<Symbol kind="Individual" name="mary>NamedIndividual mary</Symbol>

</Declarations>

<Axioms>

<Axiom>Class: Person</Axiom>

<Axiom>Class: Female</Axiom>

<Axiom>Class: Woman

EquivalentTo: Person and Female</Axiom>

<Axiom>Class: Man

EquivalentTo: Person and not Woman</Axiom>

<Axiom>ObjectProperty: hasParent</Axiom>

<Axiom>ObjectProperty: hasChild

InverseOf: hasParent</Axiom>

<Axiom>ObjectProperty: hasHusband</Axiom>

<Axiom>Class: Mother

EquivalentTo: Woman and hasChild some Person</Axiom>

<Axiom>Class: Father

EquivalentTo: Man and hasChild some Person</Axiom>

<Axiom>Class: Parent

EquivalentTo: Father or Mother</Axiom>

<Axiom>Class: Grandmother

EquivalentTo: Mother and hasChild some Parent</Axiom>

<Axiom>Class: [[MotherWithManyChildren]]

EquivalentTo: Mother and hasChild min 3 Thing</Axiom>

<Axiom>Class: [[MotherWithoutDaughter]]

EquivalentTo: Mother and hasChild only (not Woman)</Axiom>

<Axiom>Class: Wife

EquivalentTo: Woman and hasHusband some Man</Axiom>

<Axiom>Class: Married</Axiom>

<Axiom>Class: MarriedMother

EquivalentTo: Mother and Married</Axiom>

<Axiom>Class: MarriedMother

[[SubClassOf]]: Female and Person</Axiom>

<Axiom>Class: Hybrid

EquivalentTo: Woman and Man</Axiom>

<Axiom>Individual: mary

Types: Mother</Axiom>

<Axiom>Individual: mary

Facts: hasChild john</Axiom>

<Axiom>Individual: john

Types: Father</Axiom>

<Axiom>Individual: john

Facts: hasChild clara</Axiom>

<Axiom>Individual: clara</Axiom>

</Axioms>

</Ontology> 

[8:02] [[TillMossakowski|Till Mossakowski]]: We want to have one single method for retrieval, with a lot of parameters for 

controlling what is selected/filtered 

[8:07] [[User:KennethBaclawski|Ken Baclawski]]: There should be a minimum collection of metrics that every repository instance should provide. 

[8:07] [[TillMossakowski|Till Mossakowski]]: metadata includes stored metadata, as well as computed metadata (like metrics) 

[8:09] [[ToddSchneider|Todd Schneider]]: The parameters for controlling what is selected/filtered will need to be tied 

to 'metadata' maintained by the repository (hence available for individuation). 

[8:10] [[ToddSchneider|Todd Schneider]]: I thought we had considered using the 'metadata' as a template (via XSLT or 

a similar translation) for filtering. 

[8:11] [[ToddSchneider|Todd Schneider]]: Each parameter in the metadata becomes a possible 'filter'. 

[8:12] [[TillMossakowski|Till Mossakowski]]: OMG IDL 3.5 (tmp link): http://www.informatik.uni-bremen.de/~till/OMG-IDL-3.5-ptc-13-02-02.pdf 

[8:20] [[User:KennethBaclawski|Ken Baclawski]]: The consensus is to formalize the API in IDL 3.5. 

[8:28] [[User:KennethBaclawski|Ken Baclawski]]: Ken will formalize the gatekeeper in IDL. 

[8:29] [[ToddSchneider|Todd Schneider]]: I really have to go. Cheers. 

[8:31] [[User:KennethBaclawski|Ken Baclawski]]: Next hackathon session is on July 16 at the same time, same topic.  Till and Ken will be providing their IDL documents. 

[8:32] [[User:KennethBaclawski|Ken Baclawski]]: Meeting is adjourned. 

[8:32] vnc2: very productive session! 

[8:32] [[PeterYim|Peter P. Yim]]: -- session ended: 8:32am PDT -- 

-- end in-session chat-transcript -- 

6. '''Action items:''' 

* we reached consensus that we will be formalizing the API as discussed using the (OMG) Interface Definition Language (IDL) (v3.5) 
** [[TillMossakowski|Till Mossakowski]] will work on formalizing the API agreed on ([http://ontolog.cim3.net/cgi-bin/wiki.pl?OOR/ConferenceCall_2013_06_25#nid3UHB ref.]) 
** [[User:KennethBaclawski|Ken Baclawski]] will work on the OOR-Gatekeeper API (also using IDL) 
** Till & Ken will have these ready by the next hackathon session - scheduled for Tue 2013.07.16 

7. '''Any Other Business:''' ... ''(deferred to the next meeting)'' 

* decide if we want to take Aug-2013 off too (like the Ontolog community) 

* we probably want to schedule 2~3 more meetings/events (past Jul-2) 

8. Schedule Next Meeting & Adjourn: 

* Next Meetings: 
** next Meeting Tue 2013.07.02 - OOR Metadata Workshop-VIII: "Metadata in Ontology Mapping" with FIBO as our use case - co-chairs: [[MichaelGruninger|Michael Gr&uuml;ninger]] & [[MikeBennett|Mike Bennett]] 
** next OOR-Hackathon (n.02) - Tue 2013.07.16 - Co-chair: [[User:KennethBaclawski|Ken Baclawski]] & [[TillMossakowski|Till Mossakowski]] 
** ... please mark your calendars and make sure you can come! 

* Call adjourned at: 8:32 am PDT 

--

notes taken by: [[PeterYim|Peter P. Yim]] / 2013.06.25-6:29pm PDT

All participants, please review and edit to enhance accuracy and granularity of the documented proceedings. 

----

== Resources  ==

* '''Homepage''' for the Open Ontology Repository Initiative - '''[[OpenOntologyRepository]]''' - '''http://OpenOntologyRepository.org''' or simply '''http://www.oor.net''' 
* '''[[OpenOntologyRepository|OOR Charter]]''' - To promote the global use and sharing of ontologies by: 
** 1. establishing a hosted registry-repository; 
** 2. enabling and facilitating open, federated, collaborative ontology repositories; 
** 3. establishing best practices for expressing interoperable ontology and taxonomy work in registry-repositories. 
* '''"Ontology Repository" Definition''' - "An ontology repository is a facility where ontologies and related information artifacts can be stored, retrieved and managed" 
* '''Team mailling list:''' 
** OOR-Team discussion: '''[ [http://ontolog.cim3.net/forum/oor-forum/ oor-forum] ]''' message archives - http://ontolog.cim3.net/forum/oor-forum/ 
** OOR-Users discussion and support: '''[ [http://ontolog.cim3.net/forum/oor-users/ oor-users] ]''' message archives - http://ontolog.cim3.net/forum/oor-users/ 
** Developers mailling list: '''[ [http://ontolog.cim3.net/forum/oor-dev/ oor-dev] ]''' message archives - http://ontolog.cim3.net/forum/oor-dev/ 
* proceedings of our '''[[OpenOntologyRepository|previous meetings, panel discussions and workshops]]''' 

* the '''Joint [[OOR]]-OntologySummit2008 Panel Discussions''': 
** 2008_02_28 - Thursday: Joint OOR-OntologySummit2008 Panel Discussion: "Ontology Registry and Repository Technology & Infrastructure Landscape" - Co-chairs: [[LeoObrst|Leo Obrst]] & [[FrankOlken|Frank Olken]]; Panelists: [[Bargmeyer|Bruce Bargmeyer]], [[MikeDean|Mike Dean]], Mark Musen, [[FarrukhNajmi|Farrukh Najmi]] & [[PeterYim|Peter P. Yim]] - ConferenceCall_2008_02_28 
** 2008_03_27 - Thursday: Joint OOR-OntologySummit2008 Panel Discussion: "An Open Ontology Repository: Rationale, Expectations & Requirements - Session-1" - Chair: [[LeoObrst|Leo Obrst]] & [[FabianNeuhaus|Fabian Neuhaus]]; Panelists: [[WilliamBug|William Bug]], [[EvanWallace|Evan Wallace]], [[JohnLMcCarthy]], [[User:KennethBaclawski|Ken Baclawski]], [[PeterBenson|Peter Benson]] & [[RexBrooks|Rex Brooks]] - ConferenceCall_2008_03_27 
** 2008_04_03 - Thursday: Joint OOR-OntologySummit2008 Panel Discussion: "An Open Ontology Repository: Rationale, Expectations & Requirements - Session-2" - Chair: [[LeoObrst|Leo Obrst]] & [[FabianNeuhaus|Fabian Neuhaus]]; Panelists: [[DougLenat|Doug Lenat]], [[DekeSmith|Deke Smith]], [[MarciaZeng|Marcia Zeng]], [[DeniseBedford|Denise Bedford]], [[PatHayes|Pat Hayes]], [[MalaMehrotra|Mala Mehrotra]] & [[RobRaskin|Rob Raskin]] - ConferenceCall_2008_04_03 
** 2008_04_10 - Thursday: Joint OOR-OntologySummit2008 Panel Discussion: "Developing an Ontology of Ontologies for OOR" - Co-chairs: [[BarrySmith|Barry Smith]] & [[MichaelGruninger|Michael Gr&uuml;ninger]]; Panelists: [[MichaelGruninger|Michael Gr&uuml;ninger]], [[PeterHaase|Peter Haase]], Natasha Noy & [[ElisaKendall|Elisa Kendall]] - ConferenceCall_2008_04_10 

* the '''OOR Development panel sessions''': 
** 2008_08_22 - Friday: OOR Panel Discussion: "Getting OOR Development Off the Ground: Identifying Synergies & Gaps" (Take-1) - Chair: [[LeoObrst|Leo Obrst]]; Panelists: [[MikeDean|Mike Dean]], Mark Musen, [[LiDing|Li Ding]], [[Bargmeyer|Bruce Bargmeyer]] & [[BillAndersen|Bill Andersen]] - ConferenceCall_2008_08_22 
** 2009_02_19 - Thursday: Joint Ontolog-OOR Panel Discussion: "Getting OOR Development Off the Ground (Take-2): the work begins" - Chair: [[ToddSchneider|Todd Schneider]]; Panelists: Mark Musen, Natasha Noy, [[MikeDean|Mike Dean]], [[PaulBuitelaar|Paul Buitelaar]] / [[AndreasHarth|Andreas Harth]], [[MathieuDaquin|Mathieu Daquin]], [[User:KennethBaclawski|Ken Baclawski]], [[MichaelGruninger|Michael Gr&uuml;ninger]] - ConferenceCall_2009_02_19 
** 2009_07_16 - Thursday: Joint Ontolog-OOR Panel Discussion: "Integrated tools for ontology development and management: A field guide to the Stanford technology" - Chair: Mark Musen - Panelists: [[TaniaTudorache|Tania Tudorache]], [[TimRedmond|Tim Redmond]], Natasha Noy - ConferenceCall_2009_07_16 
** 2009_07_30 - Thursday: Joint Ontolog-OOR Panel Discussion: "BioPortal and related Ontology Repository Implementations and Development" (Take-3) - Chair: Natasha Noy - Panelists: [[CarlosRueda|Carlos Rueda]], [[PaulAlexander|Paul Alexander]], [[JohnGraybeal|John Graybeal]], [[MikeDean|Mike Dean]], StephenGranite, AlexGarcia, [[User:KennethBaclawski|Ken Baclawski]] - ConferenceCall_2009_07_30 
** 2010_02_19 - Friday: OOR Panel Discussion: "Coordinating our Open Ontology Repository Software Development" - Chair: [[MikeDean|Mike Dean]] - Panelists: [[JimChatigny|Jim Chatigny]], [[MichaelGruninger|Michael Gr&uuml;ninger]], [[User:KennethBaclawski|Ken Baclawski]], Natasha Noy - [[OOR/ConferenceCall_2010_02_19]] 
** 2010_04_01 - Thursday: Joint OOR-Ontolog Panel Session: "OOR Use Cases - Take-3" - Chair: [[User:KennethBaclawski|Ken Baclawski]] & [[ToddSchneider|Todd Schneider]] - Panelists: [[ToddSchneider|Todd Schneider]], [[MatthewHettinger|Matthew Hettinger]], [[User:KennethBaclawski|Ken Baclawski]] and [[MaximoGurmendez|M&aacute;ximo Gurm&eacute;ndez]] - ConferenceCall_2010_04_01 
** 2010_09_10 - Friday: Joint SIO-OOR-Ontolog Panel Discussion: "Common Logic (CL) Support for OOR" - Chair: [[JohnSowa|John F. Sowa]] - Panelists: JohnBateman-TillMossakowski, [[MichaelGruninger|Michael Gr&uuml;ninger]], [[CameronRoss|Cameron Ross]], [[AdamPease|Adam Pease]], [[PatHayes|Pat Hayes]] - ConferenceCall_2010_09_10 
** 2010_09_17 - Friday: OOR Panel Discussion - "Getting OOR Development Going - Take-IV" Workshop - Co-chairs: [[ToddSchneider|Todd Schneider]] & [[MichaelGruninger|Michael Gr&uuml;ninger]] - Panelists: [[ToddSchneider|Todd Schneider]], [[MikeDean|Mike Dean]], Natasha Noy, [[ImmanuelNormann|Immanuel Normann]], [[User:KennethBaclawski|Ken Baclawski]], [[MichaelGruninger|Michael Gr&uuml;ninger]] - [[OOR/ConferenceCall_2010_09_17]] 

*  
** 2010_10_15 - Friday: OOR Project Team Member Conference Call - discussion on the (post-BioPortal fork) OOR Architecture and API - [[OOR/ConferenceCall_2010_10_15]] 
** 2011_09_13 - Tuesday: Joint NCBO-OOR Team Meeting - "Kicking-off the Next Phase of Collaboration" - Co-chairs: [[RayFergerson|Ray Fergerson]] & [[PeterYim|Peter P. Yim]] - [[OOR/ConferenceCall_2011_09_13]] 
** 2011_11_29 - Tuesday: Joint NCBO-OOR Session - "OOR Architecture & API Workshop-IX: [[BioPortal]] & OOR Synergies" - Co-chairs: [[User:KennethBaclawski|Ken Baclawski]] & [[ToddSchneider|Todd Schneider]] - Discussant: [[RayFergerson|Ray Fergerson]] - [[OOR/ConferenceCall_2011_11_29]] 
** 2012_03_27 - Tuesday: OOR presentation: "Ontohub: an OOR-compliant Repository for Distributed Ontologies" - Chair: [[TillMossakowski|Till Mossakowski]] - [[OOR/ConferenceCall_2012_03_27]] 

* '''[[OOR Architecture & API Workshops:''' 
** 2010_11_19 - Friday: OOR Panel Discussion - "(Post-BioPortal fork) OOR Architecture and API - Take-II" - Co-chairs: [[User:KennethBaclawski|Ken Baclawski]] & [[MichaelGruninger|Michael Gr&uuml;ninger]] - Panelists: KenBaclawski+ToddSchneider, AldoGangemi+AlessandroAdamou, JouniTuominen+KimViljanen, [[EricChan|Eric Chan]] - [[OOR/ConferenceCall_2010_11_19]] 
** 2011_03_04 - Friday: OOR "Architecture & API Specification Development Workshop-I" - Co-chairs: [[User:KennethBaclawski|Ken Baclawski]] & [[ToddSchneider|Todd Schneider]] - [[OOR/ConferenceCall_2011_03_04]] 
** 2011_03_11 - Friday: OOR - "Architecture & API Specification Development Workshop-II" - Co-chairs: [[User:KennethBaclawski|Ken Baclawski]] & [[ToddSchneider|Todd Schneider]] - [[OOR/ConferenceCall_2011_03_11]] 
** 2011_03_25 - Friday: OOR - "Architecture & API Specification Development Workshop-III" - Co-chairs: [[User:KennethBaclawski|Ken Baclawski]] & [[ToddSchneider|Todd Schneider]] - [[OOR/ConferenceCall_2011_03_25]] 
** 2011_04_22 - Friday: OOR - "Architecture & API Specification Development Workshop-IV" - Co-chairs: [[User:KennethBaclawski|Ken Baclawski]] & [[ToddSchneider|Todd Schneider]] - [[OOR/ConferenceCall_2011_04_22]] 
** 2011_05_20 - Friday: OOR - "Architecture & API Specification Development Workshop-V" - Co-chairs: [[User:KennethBaclawski|Ken Baclawski]] & [[ToddSchneider|Todd Schneider]] - [[OOR/ConferenceCall_2011_05_20]] 
** 2011_06_17 - Friday: OOR - "Architecture & API Specification Development Workshop-VI" - Co-chairs: [[User:KennethBaclawski|Ken Baclawski]] & [[ToddSchneider|Todd Schneider]] - [[OOR/ConferenceCall_2011_06_17]] 
** 2011_09_20 - Tuesday: OOR - "Architecture & API Specification Development Workshop-VII" - Co-chairs: [[User:KennethBaclawski|Ken Baclawski]] & [[ToddSchneider|Todd Schneider]] - [[OOR/ConferenceCall_2011_09_20]] 
** 2011_10_11 - Tuesday: OOR - "Architecture & API Specification Development Workshop-VIII" - Co-chairs: [[User:KennethBaclawski|Ken Baclawski]] & [[ToddSchneider|Todd Schneider]] - [[OOR/ConferenceCall_2011_10_11]] 
** 2012_01_31 - Tuesday: OOR - "Architecture & API Workshop-X" - Co-chairs: [[ToddSchneider|Todd Schneider]] & [[User:KennethBaclawski|Ken Baclawski]] - [[OOR/ConferenceCall_2012_01_31]] 
** 2012_03_20 - Tuesday: OOR - "Architecture & API Workshop-XI" - Co-chairs: [[ToddSchneider|Todd Schneider]] & [[User:KennethBaclawski|Ken Baclawski]] - [[OOR/ConferenceCall_2012_03_20]] 
** 2012_05_08 - Tuesday: OOR - "Architecture & API Workshop-XII" - Co-chairs: [[ToddSchneider|Todd Schneider]] & [[User:KennethBaclawski|Ken Baclawski]] - [[OOR/ConferenceCall_2012_05_08]] 
** 2012_09_11 - Tuesday: "OOR Architecture & API Workshop-XIII" (a.k.a. "OOR Use Cases - Take-4") - Co-chairs: [[User:KennethBaclawski|Ken Baclawski]] & [[ToddSchneider|Todd Schneider]] - [[OOR/ConferenceCall_2012_09_11]] 

* '''[[OOR]] Code Development Workshops:''' 
** 2011_11_08 - Tuesday: "Getting OOR Development Going - Take-V" Workshop - Chair: [[MikeDean|Mike Dean]] - "Getting OOR Development going, on Eclipse?" - [[OOR/ConferenceCall_2011_11_08]] 
** 2011_11_22 - Tuesday: "Getting OOR Development Going - Take-VI" Workshop - Chair: [[MikeDean|Mike Dean]] - [[OOR/ConferenceCall_2011_11_22]] 
** 2012_02_28 - Tuesday: "Getting OOR Development Going - Take-VII" Workshop - Chair: [[User:KennethBaclawski|Ken Baclawski]] - [[OOR/ConferenceCall_2012_02_28]] 
** 2012_05_22 - Tuesday: "Getting OOR Development Going - Take-VIII" Workshop - Chair: [[MikeDean|Mike Dean]] - [[OOR/ConferenceCall_2012_05_22]] 

* the '''[[OOR]] Hackathon Sessions:''' 
** 2013_06_25 - Tuesday: OOR Hackathon-I: The "OOR-Ontohub-Gatekeeper API" Hackathon Session - Co-chairs: [[TillMossakowski|Till Mossakowski]] & [[User:KennethBaclawski|Ken Baclawski]] - [[OOR/ConferenceCall_2013_06_25]] 

* '''[[OOR]] Metadata Workshops:''' 
** 2011_03_18 - Friday: OOR Metadata Workshop-I - Chair: [[MichaelGruninger|Michael Gr&uuml;ninger]] - [[OOR/ConferenceCall_2011_03_18]] 
** 2011_05_13 - Friday: OOR Metadata Workshop-II - Chair: [[MichaelGruninger|Michael Gr&uuml;ninger]] - [[OOR/ConferenceCall_2011_05_13]] 
** 2011_05_27 - Friday: OOR Metadata Workshop-III - Chair: [[MichaelGruninger|Michael Gr&uuml;ninger]] - [[OOR/ConferenceCall_2011_05_27]] 
** 2011_10_18 - Tuesday: OOR Metadata Workshop-IV - Chair: [[MichaelGruninger|Michael Gr&uuml;ninger]] - [[OOR/ConferenceCall_2011_10_18]] 
** 2012_01_17 - Tuesday: OOR Metadata Workshop-V - Chair: [[MichaelGruninger|Michael Gr&uuml;ninger]] - [[OOR/ConferenceCall_2012_01_17]] 
** 2012_03_06 - Tuesday: OOR Metadata Workshop-VI - Chair: [[MichaelGruninger|Michael Gr&uuml;ninger]] - [[OOR/ConferenceCall_2012_03_06]] 
** 2012_04_24 - Tuesday: OOR Metadata Workshop-VII - Chair: [[MichaelGruninger|Michael Gr&uuml;ninger]] - [[OOR/ConferenceCall_2012_04_24]] 

* the '''[[OOR]] Infrastructure workshops:''' 
** 2011_12_13 - Tuesdayday: OOR Infrastructure Workshop - Chair: [[PeterYim|Peter P. Yim]] - [[OOR/ConferenceCall_2011_12_13]] 

* '''[[OOR]] Content Workshops:''' 
** 2010_03_12 - Friday: OOR Content Workshop-I - Co-chairs: [[PatCassidy|Pat Cassidy]] & [[DeniseBedford|Denise Bedford]] - [[OOR/ConferenceCall_2010_03_12]] 
** 2012_05_22 - Tuesday: OOR Content Workshop-II - Chair: [[MichaelGruninger|Michael Gr&uuml;ninger]] & [[MikeDean|Mike Dean]] - [[OOR/ConferenceCall_2012_05_29]] 

* '''[[OOR]] for Big Data Workshops:''' 
** 2012_08_14 - Tuesday: OOR for Big Data-I: Brainstorm Session - Chair: [[MikeDean|Mike Dean]] - [[OOR/ConferenceCall_2012_08_14]] 

* the '''[[OOR]] Funding workshops:''' 
** 2012_08_21 - Tuesday: OOR Funding-II: "Rethinking our Funding Strategy" Brainstorm Session - Chair: [[User:KennethBaclawski|Ken Baclawski]] - [[OOR/ConferenceCall_2012_08_21]] 

* the '''[[OOR]] Strategy workshops:''' 
** 2012_11_06 - Tuesday: OOR Strategy (& Funding): "OOR Straetegy: a mini- Strategic Planning" Brainstorm Session - Co-chairs: [[PeterYim|Peter P. Yim]] & [[User:KennethBaclawski|Ken Baclawski]] - [[OOR/ConferenceCall_2012_11_06]] 
** 2012_11_20 - Tuesday: OOR Strategy (& Funding): "OOR Straetegy: Tactics and Action Planning" Session - Co-chairs: [[PeterYim|Peter P. Yim]] & [[User:KennethBaclawski|Ken Baclawski]] - [[OOR/ConferenceCall_2012_11_20]] 
** 2013_05_28 - Tuesday: OOR Strategy & Tactics: "Revisiting OOR Straetegy and Tactics - I" Session - Co-chairs: [[PeterYim|Peter P. Yim]] & [[MikeDean|Mike Dean]] - [[OOR/ConferenceCall_2013_05_28]] 
** 2013_06_18 - Tuesday: OOR Strategy & Tactics: "Revisiting OOR Straetegy and Tactics - II" Session - Chair: [[PeterYim|Peter P. Yim]] - [[OOR/ConferenceCall_2013_06_18]] 

* the '''Joint IAOA-OOR-Ontolog "Ontologies and Standards" mini-series''': 
** 2011_10_20 - Thursday: Joint IAOA-OOR-Ontolog "Ontologies and Standards" mini-series session-1: Introducing the ISO NP 17347 "Ontology Integration and Interoperability ([[OntoIOp]])" Standardization Effort - Co-chairs: [[JohnBateman|John Bateman]] & [[MichaelGruninger|Michael Gr&uuml;ninger]] - ConferenceCall_2011_10_20 
** 2011_11_03 - Thursday: Joint IAOA-OOR-Ontolog "Ontologies and Standards" mini-series session-2: Invited Speaker: [[ElisaKendall|Elisa Kendall]] on "Ontology-Related Metadata Standards" - Co-chairs: [[MichaelGruninger|Michael Gr&uuml;ninger]] & [[JohnBateman|John Bateman]] - ConferenceCall_2011_11_03 
** 2012_07_17 - Tuesday: Joint IAOA-OOR-Ontolog "Ontologies and Standards" mini-series session-3: "Standardisation Coordination and Ontology Repositories" - Co-chairs: [[MichaelGruninger|Michael Gr&uuml;ninger]] & [[JohnBateman|John Bateman]] - ConferenceCall_2012_07_17 
** 2012_09_20 - Thursday: Joint IAOA-OOR-Ontolog "Ontologies and Standards" mini-series session-4: "Common Logic" - Co-chairs: [[MichaelGruninger|Michael Gr&uuml;ninger]] & [[JohnBateman|John Bateman]] - ConferenceCall_2012_09_20 

* the '''Joint OASIS-OMG-ISO-IAOA-OOR-Ontolog "Ontology-based Standards" mini-series''': 
** 2012_10_25 - Thursday: Joint OASIS-OMG-ISO-IAOA-OOR-Ontolog "Ontology-based Standards" mini-series session-1: Sharing Experiences-I - Co-chairs: [[ElisaKendall|Elisa Kendall]] & [[PeterYim|Peter P. Yim]] - Speakers: [[JamesStPierre]], [[ChetEnsign|Chet Ensign]], [[AndrewWatson|Andrew Watson]], [[DeniseWarzel|Denise Warzel]], [[MichaelGruninger|Michael Gr&uuml;ninger]], [[LeoObrst|Leo Obrst]], [[User:KennethBaclawski|Ken Baclawski]], [[EricChan|Eric Chan]] - ConferenceCall_2012_10_25 
** 2012_11_08 - Thursday: Joint OASIS-OMG-ISO-IAOA-OOR-Ontolog "Ontology-based Standards" mini-series session-2: Sharing Experiences-II - Co-chairs: [[MichaelGruninger|Michael Gr&uuml;ninger]] & [[EricChan|Eric Chan]] - Panelists: [[ElisaKendall|Elisa Kendall]], [[MarkLinehan|Mark Linehan]], [[DavideSottara|Davide Sottara]] - ConferenceCall_2012_11_08 

* the '''OOR-IPR mini-series''': 
** 2010_09_09 - Thursday: Joint OOR-Ontolog-NCBO-CC-IAOA-OASIS Panel Discussion - "IPR issues in Ontology and the OOR" session-1: an exposition on relevant IPR regimes - Keynote speaker: [[GeorgeStrawn|George Strawn]] - Chair: [[PeterYim|Peter P. Yim]] - Panelists: [[JamieClark]], [[JohnWilbanks|John Wilbanks]], [[BrucePerens|Bruce Perens]] - ConferenceCall_2010_09_09 
** 2010_09_16 - Thursday: Joint OOR-Ontolog-NCBO-CC-IAOA-OASIS Panel Discussion - "IPR issues in Ontology and the OOR" session-2: what are the IPR issues relating to open ontology repositories (and ontologies in general)? - Chair: Mark Musen - Panelists: [[CameronRoss|Cameron Ross]], [[AlanRector|Alan Rector]], [[JohnSowa|John F. Sowa]], [[BrucePerens|Bruce Perens]], [[JohnWilbanks|John Wilbanks]], [[PeterYim|Peter P. Yim]] - ConferenceCall_2010_09_16 
** 2010_09_30 - Thursday: Joint OOR-Ontolog-NCBO-CC-IAOA-OASIS Panel Discussion - "IPR issues in Ontology and the OOR" session-3: discussion and consensus on licensing arrangements for the OOR Initiative, and positions we might take on related IPR issues - chair: [[LeoObrst|Leo Obrst]] - Panelists: [[PeterYim|Peter P. Yim]], [[MikeDean|Mike Dean]], [[BrucePerens|Bruce Perens]], [[JamieClark]] - ConferenceCall_2010_09_30 

* '''OntologySummit2008''' homepage 
** '''[[OntologySummit2008_Communique]]''' 
** '''[[OntologySummit2008/FaceToFaceAgenda]] & Proceedings''' 
** The '''[http://ontolog.cim3.net/file/work/OntologySummit2008/2008-04-2829_F2F-workshop/OntologySummit2008_OOR-Presentation--MikeDean-LeoObrst-PeterYim_20080429.ppt OOR Project] Presentation''' (delivered at the [[OntologySummit2008|Ontology Summit 2008]] face-to-face workshop) 
* '''[ [http://ontolog.cim3.net/forum/ontology-summit/ ontology-summit] ]''' discussion archives - http://ontolog.cim3.net/forum/ontology-summit/2008-01/ (~5 months exchanges starting from Jan-2008) 
* Our key content pages: 
** '''[[OpenOntologyRepository_Scope]]''' 
** '''[[OpenOntologyRepository_Organization]]''' 
** '''[[OpenOntologyRepository_Process]]''' 
** '''[[OpenOntologyRepository_Policy]]''' 
** '''[[OpenOntologyRepository_IPR]]''' 
** '''[[OpenOntologyRepository_Requirement]]''' 
** '''[[OpenOntologyRepository_UseCases]]''' 
** '''[[OpenOntologyRepository_Architecture]]''' 
** '''[[OpenOntologyRepository_Approach]]''' 
** '''[[OpenOntologyRepository_Roadmap]]''' 
** '''[[OpenOntologyRepository_Plan]]''' 
** '''[[OpenOntologyRepository_Funding]]''' 
** '''[[OpenOntologyRepository_ResearchIssues]]''' 
** '''[[OpenOntologyRepository_ResearchActivity]]''' 
** '''[[OpenOntologyRepository_Development]]''' 
** '''[[OpenOntologyRepository_Metadata]]''' 
* '''[[OOR/ActiveMemberContribution]]''' 
* '''OOR Project site at [[SemWebCentral]]''' - http://oor.semwebcentral.org 
* '''Public instances of OOR''' - '''http://oor.net''' 
** [[OOR_SandBox]] - http://oor-03.cim3.net - http://sandbox.oor.net/ 
*** see also: [[OOR_SandBox_Customization]] 
** [[OOR_DevBox]] - http://oor-05.cim3.net - http://dev.oor.net/ 
** a first OOR Test instance - http://oor-06.cim3.net - http://test-00.oor.net/ 
** SOCoP[http://socop.oor.net/ _OOR] - http://oor-04.cim3.net - http://socop.oor.net/ontologies 
** [http://code.google.com/p/colore/source/browse/#svn%2Ftrunk%2Fontologies COLORE_OOR] - http://colore.oor.net 
** [http://mercury-ncbo.ornl.gov/ontologies ORNL-DAAC] - http://ornl-daac.oor.net 
** [http://mmisw.org/orr/ MMI-ORR] - http://mmisw.oor.net 
** [[NCBO]] - [http://bioportal.bioontology.org/ BioPortal] 
*** BioPortal's [bioontology-support] mailing list - see: https://mailman.stanford.edu/mailman/listinfo/bioontology-support 
** NCBO-OOR development documentation - http://www.bioontology.org/wiki/index.php/NCBO-OOR_Development 

[[Category:Event_Meeting]]    [[Category:OOR]]