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Ontolog invited Speaker Presentation - Dr. Timothy Redmond - Thu 2006-06-29

Conference Call Details

  • Subject: Invited Speaker Presentation - "Developing Applications in Protégé: The Protégé Plugin Architecture" - by Dr. Timothy Redmond (Stanford Medical Informatics) - Thu 2006-06-29
  • Date: Thursday, June 29, 2006
  • Start: 10:30 AM PDT / 1:30 PM EDT / Time: 17:30 UTC
    • see world clock for other time zones)
    • Duration: 1.5~2.0 hours
  • Dial-in Number: +1-641-696-6600 (Iowa, USA)
    • Participant Access Code: "686564#"
  • Shared-screen support (VNC session) will be started 5 minutes before the call at: http://vnc2.cim3.net:5800/
    • view-only password: "ontolog"
    • if you plan to be logging into this shared-screen option (which the speaker may be navigating), and you are not familiar with the process, please try to call in 5 minutes before the start of the session so that we can work out the connection logistics. Help on this will generally not be available once the presentation starts.
    • people behind corporate firewalls may have difficulty accessing this. If that is the case, please download the slides below and runing them locally. The speaker will prompt you to advance the slides during the talk.
  • RSVP with your name and affiliation to peter.yim@cim3.com. This will help us prepare enough conferencing resources.
  • Please note that this session will be recorded, and the audio archives is expected to be made available as open content to our community membership and the public at-large under our prevailing open IPR policy.
  • Special thanks to Professor Mark Musen (Stanford University) for introducing Dr. Redmond to our community.

Attendees

  • Also Expected (and who may have joined us after the roll call):
    • Jim Wessely (ADS)
    • Steve Ihnen
    • Mark Greaves (for the first 45 minutes)
    • Katrina Pearson (NIH)
    • ...(to register for participation, please add your name and affiliation here or e-mail <peter.yim@cim3.com>, so that we can reserve enough resources to support the session.)...

Agenda & Proceedings

  • Dr. Timothy Redmond, from Stanford Medical Informatics and Chief Protégé Architect, presents his talk entitled: "Developing Applications in Protégé: The Protégé Plugin Architecture"
TimRedmond_20060629.png [picture of Dr. Timothy Redmond]
Abstract: (by TimRedmond)
Protégé is a very popular ontology editor. In addition to its capabilities as a simple application for viewing and editing ontologies, it also boasts a highly flexible plugin architecture and a rich knowledge base application interface. In this talk we will describe approaches for developing graphical plugins embedded in the Protégé graphical interface and to develop standalone applications based on the Protégé knowledge base application interface.
  • Session Format and Agenda:
    • this will be virtual session over a phone conference setting, augmented by shared computer screen support
    1. The session will start with a brief self-introduction of the attendees (~10 min.)
    2. Introduction of the Invited Speaker
    3. Presentation by the invited speaker (45~60 min.)
    4. Open discussion (30~45 min.)
  • Bio of Dr. Timothy Redmond:
Dr. Timothy Redmond is a recent addition to Stanford Medical Informatics' Protégé project team who is taking over the responsibilities of the chief Protégé architect. He received a B.S. in Mathematics from the University of California, Santa Barbara (1980) and a Ph.D. in mathematics from Princeton University (1984). Since that time, Dr. Redmond has worked in the area of formal methods and their application to verifying the correctness and security of computer systems. He has extensive experience with formal methods including experience using systems such as HOL, InaJo and SDVS.
  • If you have questions for the presenter, we appreciate your posting them here: (please identify yourself)
    • ... (post you questions here, the speaker will be fielding them during the open discussion session) ...
    • Questions from Jonathan Cheyer:
      • 1) Is there a project plan or roadmap for future versions of Protege?
      • 2) If not, is there an estimated timeframe for 3.2 final release?
      • 3) Can you talk about plans for improved database support? Specifically, scalability improvements to code and scalability testing (large ontologies, many users, connection pooling), long-running server support.
  • For those who have further questions for Dr. Redmond, please post them to the ontolog forum so that we can all benefit from the discourse.
  • Session ended 2006-06-29 12:12 pm PDT

Session Recording of the Tim Redmond Talk

(Thanks to Bob Smith and Peter P. Yim for their help with getting the session recorded. =ppy)

  • To download the audio recording of the presentation, click here
    • the playback of the audio files require the proper setup, and an MP3 compatible player on your computer.
  • Conference Date and Time: June 29, 2006 10:40am~12:25pm Pacific Daylight Time
  • Duration of Recording: 1 Hour 27 Minutes
  • Recording File Size: 10.2 MB (in mp3 format)
  • Telephone Playback Expiration Date: July 9, 2006 12:26 PM PDT
    • Prior to the above Expiration Date, one can call-in and hear the telephone playback of the session.
    • Playback Dial-in Number: +1-805-620-4002 (Ventura, CA, USA)
    • Playback Access Code: 985787#
    • suggestions:
      • its best that you listen to the session while having the presentation opened in front of you. You'll be prompted to advance slides by the speaker.
      • if you want to skip the introductions and jump straight to the body of the talk, please start your playback at the 0:10:12 time point.



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